Cookbook

End-to-end recipes that combine the client and server in realistic analyses. Each recipe is self-contained and answers a specific research question — copy it, adapt it, run it.

If the User Guide pages are reference material organised by capability, the cookbook is organised by task. Use the User Guide to understand what a function does; use the cookbook to see how it composes with everything else.

• Phenotype analysis
• Filtered EWAS on NHANES
• GxE interaction with a pathway prior
• Building a custom report end-to-end
• Container and HPC workflows
• HPC job array recipe